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Table 1 Sequence depth and coverage statistics

From: Construction of a high-density genetic map: genotyping by sequencing (GBS) to map purple seed coat color (Psc) in hulless barley

Sample Clean readsa Mapping readsb Mapping rate c Average depthd Coverage1×e Coverage4×f
Kunlun10 13,850,762 13,395,851 96.72 24.19 8.33 4.33
Nierumuzha 14,133,242 13,682,278 96.81 24.55 8.39 4.37
  1. aNumber of reads used for the alignment
  2. bNumber of clean reads that mapped to the reference genome
  3. cThe percentage of reads that mapped to the genome
  4. dAverage sequencing depth
  5. ePercentage of the reference genome with at least 19 coverage
  6. fPercentage of the reference genome with at least 49 coverage
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Hereditas

ISSN: 1601-5223

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